About
I am a Research Assistant Professor at the Biocomplexity Institute, University of Virginia, where I work on computational modeling and simulation for biological and socio-technical systems. My work spans network science, stochastic processes, and agentic AI systems, applied to domains including epidemiology, forced migration, healthy buildings, and neuroscience. I have published 100+ technical articles (3600+ citations on Google Scholar, h-index 32) across diverse venues such as PNAS, Nature Communications, ICML, and KDD, and received a best paper award at IEEE BigData 2022. I have contributed to national collaborative efforts such as CDC FluSight, the COVID-19 Forecast Hub, and the Scenario Modeling Hubs, and have led or co-led multiple CDC-, CSTE-, NSF-, NIH-, and ARPA-H-funded projects on computational modeling for infectious disease epidemiology. I was a recipient of UVA's Collaborative Excellence in Public Service Award in 2022 for my work supporting the Virginia Department of Health during its COVID-19 response. I have also managed several academia-industry partnerships with Google, Metaculus, Kinsa Health, and Signature Science.
I mentor graduate and undergraduate students on these problems most years. If you are looking to join, see working with me.
Research Themes
A word cloud built from the abstracts of my publications, sized by how distinctive each term is to my work and colored by research theme. Click any word to see the papers behind it.
Collaboration Network
Co-authors I’ve published with more than once, sized by number of papers we share and shaded by timespan of collaboration. Lines link people who publish together, so research groups cluster. Hover over a node for full names and strongest ties, and click to see our papers together. Scroll to zoom, drag empty space to pan, and drag a node to jostle the graph.
News
- New preprint: multi-season evaluation of CDC FluSight categorical trend forecasts.
- Two abstracts accepted at iCSD 2026, hosted at UVA in September.
- New preprint: EpiFlow, improving the utility of wastewater signals for disease forecasting.
- New preprint: EpiNarrate, agentic generation of grounded narratives from epidemiological data.
- Invited talk on PatchSim for pandemic response support at the 2026 SIAM Conference on the Life Sciences.
Professional Experience
- 09/2021 – nowResearch Assistant Professor · Biocomplexity Institute, University of Virginia
- 10/2018 – 09/2021Research Scientist · Biocomplexity Institute & Initiative, University of Virginia
- 12/2017 – 10/2018Computational Health Data Scientist · Biocomplexity Institute, Virginia Tech
- 02/2015 – 12/2017Postdoctoral Associate · Biocomplexity Institute, Virginia Tech
- 05/2014 – 11/2014Research Assistant · Dept. of Information Engineering, Chinese University of Hong Kong
- 05/2007 – 08/2007Student Intern · Bell Research Labs India
Education
- 08/2008 – 08/2014Ph.D., Electrical & Communication Engineering · Indian Institute of Science
Thesis: Influence Dynamics on Social Networks · Advisor: Anurag KumarDefense slides
- 08/2004 – 06/2008B.E., Electronics & Communication Engineering · College of Engineering Guindy, Anna University
Select Publications
View full publication list → · View talks & abstracts →- R. Datta, Z. Guan, ..., SV, N. Ramakrishnan, and A. Vullikanti, “Agentic Framework for Epidemiological Modeling”, International Conference on Machine Learning (ICML), 2026
- B. Espinoza, SV, A. S. Warren, B. L. Lewis, H. V. Poor, S. A. Levin, and M. V. Marathe, “Integrated framework to study genomic surveillance of selective sweeps in multivariants dynamics”, Proceedings of the National Academy of Sciences, 123(11), e2521031123, 2025
- S. Mathis, A. Webber, ..., SV, ..., M. Biggerstaff, R. Borchering, “Evaluation of FluSight influenza forecasting in the 2021–22 and 2022–23 seasons with a new target laboratory-confirmed influenza hospitalizations”, Nature Communications 15.1, 6289, 2024
- E. Howerton, L. Contamin, ..., SV, ..., K. Shea, C. Viboud, and J. Lessler, “Evaluation of the US COVID-19 Scenario Modeling Hub for informing pandemic response under uncertainty”, Nature Communications 14.1, 7260, 2023
- B. Espinoza, A. Adiga, SV, A. S. Warren, ..., S. Levin, and M. Marathe, “Coupled models of genomic surveillance and evolving pandemics with applications for timely public health interventions”, Proceedings of the National Academy of Sciences 120.48, e2305227120, 2023
- P. V. Prasad, M. K. Steele, C. Reed, ..., SV, ..., and M. Biggerstaff, “Multimodeling approach to evaluating the efficacy of layering pharmaceutical and nonpharmaceutical interventions for influenza pandemics”, Proceedings of the National Academy of Sciences 120.28, e2300590120, 2023
- P. Bhattacharya, J. Chen, S. Hoops, D. Machi, B. Lewis, SV, ..., C. Barrett, and M. Marathe, “Data-Driven Scalable Pipeline using National Agent-Based Models for Real-time Pandemic Response and Decision Support”, The International Journal of High Performance Computing Applications (IJHPCA), 2022 Gordon Bell finalist
- A. Adiga, G. Kaur, L. Wang, B. Hurt, P. Porebski, SV, B. Lewis, and M. Marathe, “Enhancing COVID-19 Ensemble Forecasting Model Performance Using Auxiliary Data Sources”, IEEE International Conference on Big Data (IEEE BigData), 2022 Best Paper Award
- SV, A. Sadilek, A. Fadikar, ..., L. Wang, and M. Marathe, “Forecasting influenza activity using machine-learned mobility map”, Nature Communications 12.1, 1–12, 2021
- SV, J. Chen, A. Fadikar, S. Gupta, D. Higdon, B. Lewis, M. Marathe, H. Mortveit, and A. Vullikanti, “Optimizing spatial allocation of seasonal influenza vaccine under temporal constraints”, PLOS Computational Biology 15.9, e1007111, 2019
Open Data & Software
License, language and last activity are stated for each, so you can tell what you are free to reuse before opening the repository. Dates are the last commit, not a maintenance promise.
IDOBE
Infectious Disease Outbreak forecasting Benchmark Ecosystem
For forecasting teams comparing models against shared outbreak targets and baselines.
github.com/NSSAC/IDOBEPEpiTA
Phase-based Epidemic Time series Analyzer
For analysts turning an epidemic curve into categorical phase and trend indicators.
github.com/NSSAC/PEpiTAPatchSim
Metapopulation SEIR simulation engine
For modelers simulating an outbreak across regions linked by travel. The most used of these.
github.com/NSSAC/PatchSimPatchFlow
Synthetic flow data for PatchSim
Ready-made mobility networks for countries worldwide, to drive PatchSim without sourcing travel data.
github.com/NSSAC/patchflow-dataCryptic Scenario Modeling Hub
Synthetic outbreak data for pandemic cryptic phase modeling
For groups contributing projections on the undetected early phase of a pandemic.
github.com/midas-network/cryptic-scenario-modeling-hubCOVID-19 Flight Cancellations
Flight cancellations related to 2019-nCoV (COVID-19)
Airline cancellations from the earliest weeks of the pandemic, for importation-risk and mobility work.
doi.org/10.18130/V3/Z6524P