Portrait of Srinivasan Venkatramanan

Srinivasan (Srini) Venkatramanan

Research Assistant Professor

Biocomplexity Institute, University of Virginia
946 Grady Avenue, Suite 100, Charlottesville, VA 22903

About

I am a Research Assistant Professor at the Biocomplexity Institute, University of Virginia, where I work on computational modeling and simulation for biological and socio-technical systems. My work spans network science, stochastic processes, and agentic AI systems, applied to domains including epidemiology, forced migration, healthy buildings, and neuroscience. I have published 100+ technical articles (3600+ citations on Google Scholar, h-index 32) across diverse venues such as PNAS, Nature Communications, ICML, and KDD, and received a best paper award at IEEE BigData 2022. I have contributed to national collaborative efforts such as CDC FluSight, the COVID-19 Forecast Hub, and the Scenario Modeling Hubs, and have led or co-led multiple CDC-, CSTE-, NSF-, NIH-, and ARPA-H-funded projects on computational modeling for infectious disease epidemiology. I was a recipient of UVA's Collaborative Excellence in Public Service Award in 2022 for my work supporting the Virginia Department of Health during its COVID-19 response. I have also managed several academia-industry partnerships with Google, Metaculus, Kinsa Health, and Signature Science.

I mentor graduate and undergraduate students on these problems most years. If you are looking to join, see working with me.

News

  • New preprint: multi-season evaluation of CDC FluSight categorical trend forecasts.
  • Two abstracts accepted at iCSD 2026, hosted at UVA in September.
  • New preprint: EpiFlow, improving the utility of wastewater signals for disease forecasting.
  • New preprint: EpiNarrate, agentic generation of grounded narratives from epidemiological data.
  • Invited talk on PatchSim for pandemic response support at the 2026 SIAM Conference on the Life Sciences.

Professional Experience

  • 09/2021 – nowResearch Assistant Professor · Biocomplexity Institute, University of Virginia
  • 10/2018 – 09/2021Research Scientist · Biocomplexity Institute & Initiative, University of Virginia
  • 12/2017 – 10/2018Computational Health Data Scientist · Biocomplexity Institute, Virginia Tech
  • 02/2015 – 12/2017Postdoctoral Associate · Biocomplexity Institute, Virginia Tech
  • 05/2014 – 11/2014Research Assistant · Dept. of Information Engineering, Chinese University of Hong Kong
  • 05/2007 – 08/2007Student Intern · Bell Research Labs India

Education

  • 08/2008 – 08/2014Ph.D., Electrical & Communication Engineering · Indian Institute of Science
    Thesis: Influence Dynamics on Social Networks · Advisor: Anurag KumarDefense slides
  • 08/2004 – 06/2008B.E., Electronics & Communication Engineering · College of Engineering Guindy, Anna University

Open Data & Software

License, language and last activity are stated for each, so you can tell what you are free to reuse before opening the repository. Dates are the last commit, not a maintenance promise.

IDOBE

Infectious Disease Outbreak forecasting Benchmark Ecosystem

For forecasting teams comparing models against shared outbreak targets and baselines.

github.com/NSSAC/IDOBE
  • CC BY 4.0
  • Jupyter
  • Updated Aug 2026

PEpiTA

Phase-based Epidemic Time series Analyzer

For analysts turning an epidemic curve into categorical phase and trend indicators.

github.com/NSSAC/PEpiTA
  • MIT
  • Jupyter
  • Updated Jun 2024

PatchSim

Metapopulation SEIR simulation engine

For modelers simulating an outbreak across regions linked by travel. The most used of these.

github.com/NSSAC/PatchSim
  • MIT
  • Jupyter
  • Updated Sep 2025

PatchFlow

Synthetic flow data for PatchSim

Ready-made mobility networks for countries worldwide, to drive PatchSim without sourcing travel data.

github.com/NSSAC/patchflow-data
  • CC BY-NC 4.0
  • Data
  • Updated Jul 2021

Cryptic Scenario Modeling Hub

Synthetic outbreak data for pandemic cryptic phase modeling

For groups contributing projections on the undetected early phase of a pandemic.

github.com/midas-network/cryptic-scenario-modeling-hub
  • MIT
  • Data
  • Updated May 2026

COVID-19 Flight Cancellations

Flight cancellations related to 2019-nCoV (COVID-19)

Airline cancellations from the earliest weeks of the pandemic, for importation-risk and mobility work.

doi.org/10.18130/V3/Z6524P
  • CC0 1.0
  • Data
  • UVA Dataverse, v1.0, Feb 2020