Portrait of Srinivasan Venkatramanan

Srinivasan (Srini) Venkatramanan

Research Assistant Professor

Biocomplexity Institute, University of Virginia
946 Grady Avenue, Suite 100, Charlottesville, VA 22903

About

I am a Research Assistant Professor at the Biocomplexity Institute, University of Virginia, where I work on computational modeling and simulation for infectious disease forecasting and response. My work spans network science, stochastic processes, and — increasingly — agentic AI systems, applied to domains including epidemiology, human mobility, healthy buildings, and neuroscience. I have contributed to national collaborative efforts such as CDC FluSight and the Scenario Modeling Hubs, and have led or co-led several CSTE-, NIH-, and ARPA-H-funded projects on infectious disease epidemiology. I was a recipient of the Collaborative Excellence in Public Service Award in 2022 for my work supporting the Virginia Department of Health during its COVID-19 response. I have managed multiple academia-industry partnerships with Google, Metaculus, Kinsa Health, and Signature Science.

Research Interests

Areas

  • Computational modeling & simulation
  • Agentic AI systems
  • Network science
  • Stochastic processes

Domains

  • AI for science
  • Healthy buildings
  • Human mobility
  • Epidemiology
  • Forecasting
  • Neuroscience

Research Themes

Browse all publications →

A word cloud built from the abstracts of my publications, sized by how distinctive each term is to my work and colored by research theme. Click any word to see the papers behind it.

Word cloud of recurring terms across my research abstracts

Professional Experience

  • 09/2021 – nowResearch Assistant ProfessorBiocomplexity Institute, University of Virginia
  • 10/2018 – 09/2021Research ScientistBiocomplexity Institute & Initiative, University of Virginia
  • 12/2017 – 10/2018Computational Health Data ScientistBiocomplexity Institute, Virginia Tech
  • 02/2015 – 12/2017Postdoctoral AssociateBiocomplexity Institute, Virginia Tech
  • 05/2014 – 11/2014Research AssistantDept. of Information Engineering, Chinese University of Hong Kong
  • 05/2007 – 08/2007Student InternBell Research Labs India

Education

  • 08/2008 – 08/2014Ph.D., Electrical & Communication EngineeringIndian Institute of Science
  • 08/2004 – 06/2008B.E., Electronics & Communication EngineeringCollege of Engineering Guindy, Anna University
  • R. Datta, Z. Guan, . . ., SV, N. Ramakrishnan, and A. Vullikanti, “Agentic Framework for Epidemiological Modeling”, accepted at International Conference on Machine Learning (ICML), 2026
  • B. Espinoza, SV, A. S. Warren, B. L. Lewis, H. V. Poor, S. A. Levin, and M. V. Marathe, “Integrated framework to study genomic surveillance of selective sweeps in multivariants dynamics”, Proceedings of the National Academy of Sciences, 123(11), e2521031123, 2025
  • S. Mathis, A. Webber, . . ., SV, . . ., M. Biggerstaff, R. Borchering, “Evaluation of FluSight influenza forecasting in the 2021–22 and 2022–23 seasons with a new target laboratory-confirmed influenza hospitalizations”, Nature Communications 15.1, 6289, 2024
  • E. Howerton, L. Contamin, . . ., SV, . . ., K. Shea, C. Viboud, and J. Lessler, “Evaluation of the US COVID-19 Scenario Modeling Hub for informing pandemic response under uncertainty”, Nature Communications 14.1, 7260, 2023
  • B. Espinoza, A. Adiga, SV, A. S. Warren, . . ., S. Levin, and M. Marathe, “Coupled models of genomic surveillance and evolving pandemics with applications for timely public health interventions”, Proceedings of the National Academy of Sciences 120.48, e2305227120, 2023
  • P. V. Prasad, M. K. Steele, C. Reed, . . ., SV, . . ., and M. Biggerstaff, “Multimodeling approach to evaluating the efficacy of layering pharmaceutical and nonpharmaceutical interventions for influenza pandemics”, Proceedings of the National Academy of Sciences 120.28, e2300590120, 2023
  • P. Bhattacharya, J. Chen, S. Hoops, D. Machi, B. Lewis, SV, . . ., C. Barrett, and M. Marathe, “Data-Driven Scalable Pipeline using National Agent-Based Models for Real-time Pandemic Response and Decision Support”, The International Journal of High Performance Computing Applications (IJHPCA), 2022 Gordon Bell finalist
  • A. Adiga, G. Kaur, L. Wang, B. Hurt, P. Porebski, SV, B. Lewis, and M. Marathe, “Enhancing COVID-19 Ensemble Forecasting Model Performance Using Auxiliary Data Sources”, IEEE International Conference on Big Data (IEEE BigData), 2022 Best Paper Award
  • SV, A. Sadilek, A. Fadikar, . . ., L. Wang, and M. Marathe, “Forecasting influenza activity using machine-learned mobility map”, Nature Communications 12.1, 1–12, 2021
  • SV, J. Chen, A. Fadikar, S. Gupta, D. Higdon, B. Lewis, M. Marathe, H. Mortveit, and A. Vullikanti, “Optimizing spatial allocation of seasonal influenza vaccine under temporal constraints”, PLOS Computational Biology 15.9, e1007111, 2019

Open Data & Software

IDOBE

Infectious Disease Outbreak forecasting Benchmark Ecosystem

github.com/NSSAC/IDOBE

PEpiTA

Phase-based Epidemic Time series Analyzer

github.com/NSSAC/PEpiTA
interactive version →

PatchSim

Metapopulation SEIR simulation engine

github.com/NSSAC/PatchSim

PatchFlow

Synthetic flow data for PatchSim

github.com/NSSAC/patchflow-data

Cryptic Scenario Modeling Hub

Synthetic outbreak data for pandemic cryptic phase modeling

github.com/midas-network/cryptic-scenario-modeling-hub

COVID-19 Flight Cancellations

Flight cancellations related to 2019-nCoV (COVID-19)

doi.org/10.18130/V3/Z6524P